Workshops / Training At present, Bioinformatics is a fast growing field both at the level of Academia and Industry. At ArrayGen, we are keen to impart the expertise in genome-informatics through workshops and training programs. ArrayGen runs a series of bioinformatics workshops to train researchers in developing their own data analysis methods, and enabling them choose the right tools in their specific research projects.Each workshop includes both lectures and hands-on sessions.



ArrayGen offers the following genomics and bioinformatics training courses with a focus on improving participants' practical applications, by using the appropriate theoretical knowledge: Bioinformatics ( Understanding Genomics ) Custom Data Training Program with your own datasets till publication CADD Training Program Biomarker Development Cancer Bioinformatics CRISPR/Cas9 for Genome Editing Training Program Phylogenomics Advanced R / Perl / Bioperl / Python / Biopython / Java for Biologist Microarray Data analysis Next Generation Sequencing (NGS) De novo genome and transcriptome assembly Chip-Seq Data Analysis RNA-Seq Data Analysis (Ref/Denovo) Assay for Transposase-Accessible Chromatin (ATAC-seq) Data Analysis Single Cell RNA-Seq (scRNA-seq) long non-coding RNA sequencing(lncRNA-Seq) Data Analysis DNA-Seq Data Analysis miRNA Data Analysis Metagenomics Data Analysis MethylSeq(DNA Methylation) Data Analysis LncRNASeq Genome Variant Data Analysis Whole Genome Assembly CircRNASeq Genome / Exome Variant Data Analysis RAD-Seq Data analysis Objectives To create an awareness with respect to the basic tools and techniques used in bioinformatics at industrial level

To provide complete hands-on-training in the basic tools and techniques

To inspire and motivate all life sciences to apply these techniques in their research programmes





## 10% Discount if you register before 25th September, 2020 . Hurry up!!



Short Term Industrial Bioinformatics Training for life sciences Training Information Period of Training Offline - 30 days / 15 days

Online - 30 days / 15 days



30 days program will involve all the three modules and 15 days program will involve two modules. Module I is mandatory in both the programs. The 15 days training will involve Module I and Module III or Module I and Module II. Course Fee

For course fee please request you to contact us at info@arraygen.com



Training Starting Date Batch I - 7th September, 2020 Batch II - 14th September, 2020 Batch III- 21th September, 2020 Batch IV- 28th September, 2020 Our training is one to one and training can also be started anytime and anydate as per the candidate convenience.

** Weekend Batches are also available as per the request Our training is one to one and training can also be started anytime and anydate as per the candidate convenience.** Weekend Batches are also available as per the request

Training Schedule Offline - 2 Hours Daily (Monday To Saturday)

Online - 2 Hours Daily (Monday To Saturday) Module - I Advanced Bioinformatics & basic programming Topics - Introduction to Bioinformatics

- Understanding Genomics Bioinformatics

- Databases & tools (NCBI,UCSC,BLAST,BLAT etc)

- Gene Prediction

- Genome Annotation

- Biological Functional Annotation

- Genome Vizualization

- Hands on practical for Perl / Python / Java programming

- Unix based commands for NGS data analysis





NOTE: Module-I is designed as per the industry exposure which will be completely different than academic bioinformatic and with this it will be completely helpful to understand NGS & Microarray data analysis



Module - II Microarray (Gene Expression Profiling) Data Analysis Topics - Microarray techniques detailed understanding

- Microarray chip designing

- Introduction & Hands on practical on R for microarray data analysis

- Quality control & Normalization

- Differential Expressed Genes(UpRegulated & DownRegulated)

- Pathway & Gene Ontology Enrichment Analysis

- Pathway Network analysis using stringDB(PPI) & Cytoscape

- Pathway Network Analysis using KEGG Mapper tool for all DEG genes

- Different plots (Heatmap,volcano plot etc) using R Module - III Next Generation Sequencing (NGS) - RNASeq Data Analysis Topics

- Data Retrieval (NCBI SRA) & Introduction to data types

- Read Quality Check (FastQC & Cutadapt)

- Alignment of reads using reference Genome (Tophat)

- Visualization of mapped reads (UCSC / IGV / ArrayGen Genome Browser)

- Gene Expression Quantification (Coverage,FPKM)

- Differential expression analysis( Cufflink, cuffmerge & cuffdiff )

- Different plots (Heatmap,volcano plot etc) using R

- Pathway & Gene ontology enrichment analysis

- Pathway Network analysis using stringDB(PPI) & Cytoscape

- Pathway Network Analysis using KEGG Mapper tool for all DEG genes





NOTE: In module-III Candidate can select Any one NGS applications DNASeq/RNASeq/Metagenomics/Chipseq/Methylseq/miRNASeq/Denovo whole Genome Assembly etc for more details please visit at



--- Candidates can also select multiple application of NGS as per the requirement



--- 30 Days program is designed by experts with 9+ years of experience and with the completion of course one can actively work on any NGS application as the need of Industry as well as for research. Candidate will be become independent to anlyze NGS datasets of their own.



- Overview of NGS & detailed understanding- Data Retrieval (NCBI SRA) & Introduction to data types- Read Quality Check (FastQC & Cutadapt)- Alignment of reads using reference Genome (Tophat)- Visualization of mapped reads (UCSC / IGV / ArrayGen Genome Browser)- Gene Expression Quantification (Coverage,FPKM)- Differential expression analysis( Cufflink, cuffmerge & cuffdiff )- Different plots (Heatmap,volcano plot etc) using R- Pathway & Gene ontology enrichment analysis- Pathway Network analysis using stringDB(PPI) & Cytoscape- Pathway Network Analysis using KEGG Mapper tool for all DEG genesIn module-III Candidate can select Any one NGS applications DNASeq/RNASeq/Metagenomics/Chipseq/Methylseq/miRNASeq/Denovo whole Genome Assembly etc for more details please visit at http://www.arraygen.com/online-ngs-courses.php --- Candidates can also select multiple application of NGS as per the requirement--- 30 Days program is designed by experts with 9+ years of experience and with the completion of course one can actively work on any NGS application as the need of Industry as well as for research. Candidate will be become independent to anlyze NGS datasets of their own. Eligibility B.Tech. / B.Sc. / M.Tech. / M.Sc. in Biological Science, Computer science, Pharmacy, Agriculture, Biotechnology, Molecular biology, Medicine, clinical research and other relevant Qualification in the life sciences areas are eligible. Certificate All the participants will receive certificates on successful completion of training Place ArrayGen, Pune, India Contact info@arraygen.com

NOTE: In module- III candidate can select any one application and for detail information please visit at http://www.arraygen.com/online-ngs-courses.php



However candidate can select multiple applications of NGS and there will be additional cost for each extra module selection.













The workshops and training programs can be held on-site at the client’s location or online one to one. If you want to conduct a Seminar or Workshop or short-term Training in Bioinformatics, Bio-IT, Next Generation Sequencing, Genomics, etc. at your College/ University/ Conference then feel free to write to us at info@arraygen.com



