A 13,000-year-old skeleton uncovered in a Mexican cave is one of the oldest genetically intact human skeletons ever found in the western hemisphere.

Scientists say the skeleton belonged to a teenage girl, and genetic tests on the superbly preserved remains found by cave divers have answered questions about the origins of the New World's (western hemisphere's) first people.

These findings, published in the journal Science, determined that the Ice Age humans who first crossed into the Americas over a land bridge that formerly linked Siberia to Alaska did in fact give rise to modern Native American populations rather than hypothesised later entrants into the hemisphere.

Scientists exploring deep beneath the jungles of Mexico's eastern Yucatán peninsula discovered the girl's remains underwater alongside bones of more than two dozen beasts, including sabre-toothed tigers, cave bears, giant ground sloths and an elephant relative called a gomphothere.

The girl, with her intact cranium and preserved DNA, was entombed for eons in a deeply submerged cave chamber before being discovered in 2007. The petite, slightly built girl - about 1.47 metres tall - is thought to have been 15 or 16 years old when she died.

She may have ventured into dark passages of a cave to find fresh water and fallen to her death into what archaeologist James Chatters of the firm of Applied Paleoscience, one of the leaders of the study, called an "inescapable trap" 30 metres deep - a bell-shaped pit dubbed Hoyo Negro, "black hole" in Spanish.

Mr Chatters said the chamber, more than 40 metres below sea level - was "a time capsule of the environment and human life" at the end of the Ice Age.

Ancient journey to the new world

Diver Susan Bird examines the 13,000-year-old skull. ( Reuters: Paul Nicklen/National Geographic )

The divers who discovered the skeleton named her Naia, after a water nymph from Greek mythology.

One of the divers, Alberto Nava, spotted her skull resting atop a small ledge.

"It was a small cranium laying upside down with a perfect set of teeth and dark eye sockets looking back at us," Mr Nava said.

The pit was dry when she fell but Ice Age glaciers melted about 10,000 years ago, inundating the caves with water.

Tests determined she lived between 13,000 and 12,000 years ago.

Scientists have long debated the origins of the first people of the Americas. Many scientists think these hunter-gatherers crossed the former land bridge between 26,000 and 18,000 years ago and subsequently pushed into North America and South America starting perhaps 17,000 years ago.

But the most ancient New World human remains have confused scientists because, like Naia, they have narrower skulls and other features different from today's Native Americans.

This led to speculation that these earliest New World people might represent an earlier migration from a different part of the world than the true ancestors of modern Native Americans.

But mitochondrial DNA, passed down from mother to child, extracted from the girl's wisdom tooth showed she belonged to an Asian-derived genetic lineage shared only by today's Native Americans.

This indicates cranial and other differences between the earliest New World human remains and today's Native Americans are due to evolutionary changes that unfolded after the first migrants crossed onto the land bridge, the researchers said.

Reuters