C. Xu, W. Zipfel, J. B. Shear, R. M. Williams, and W. W. Webb, “Multiphoton fluorescence excitation: new spectral windows for biological nonlinear microscopy,” Proc. Natl. Acad. Sci. U.S.A. 93(20), 10763–10768 (1996). [Crossref] [PubMed]

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P. T. So, C. Y. Dong, B. R. Masters, and K. M. Berland, “Two-photon excitation fluorescence microscopy,” Annu. Rev. Biomed. Eng. 2(1), 399–429 (2000). [Crossref] [PubMed]

M. Drobizhev, A. Rebane, Z. Suo, and B. Spangler, “One-, two- and three-photon spectroscopy of π-conjugated dendrimers: cooperative enhancement and coherent domains,” J. Lumin. 111(4), 291–305 (2005). [Crossref]

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A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013). [Crossref] [PubMed]

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S.-Y. Lee, Y.-H. Lai, K.-C. Huang, Y.-H. Cheng, T.-F. Tseng, and C.-K. Sun, “In vivo sub-femtoliter resolution photoacoustic microscopy with higher frame rates,” Sci. Rep. 5, 15421 (2015). [Crossref] [PubMed]

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Alon, E.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Amodei, D.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

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Barnett, L.

C. Stoltzfus, L. Barnett, A. Rebane, T. Hughes, M. Drobizhev, G. Wicks, and A. Mikhailov, “A multidimensional screening method for the selection of two-photon enhanced fluorescent proteins,” Proc. SPIE 8956, 895611 (2014).

[Crossref]

Barnett, L. M.

C. R. Stoltzfus, L. M. Barnett, M. Drobizhev, G. Wicks, A. Mikhaylov, T. E. Hughes, and A. Rebane, “Two-photon directed evolution of green fluorescent proteins,” Sci. Rep. 5, 11968 (2015).

[Crossref] [PubMed]

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P. T. So, C. Y. Dong, B. R. Masters, and K. M. Berland, “Two-photon excitation fluorescence microscopy,” Annu. Rev. Biomed. Eng. 2(1), 399–429 (2000).

[Crossref] [PubMed]

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S. Bovetti, C. Moretti, and T. Fellin, “Mapping brain circuit function in vivo using two-photon fluorescence microscopy,” Microsc. Res. Tech. 77(7), 492–501 (2014).

[Crossref] [PubMed]

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A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Carmena, J. M.

K. B. Clancy, A. C. Koralek, R. M. Costa, D. E. Feldman, and J. M. Carmena, “Volitional modulation of optically recorded calcium signals during neuroprosthetic learning,” Nat. Neurosci. 17(6), 807–809 (2014).

[Crossref] [PubMed] A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Chen, J. L.

F. F. Voigt, J. L. Chen, R. Krueppel, and F. Helmchen, “A modular two-photon microscope for simultaneous imaging of distant cortical areas in vivo,” Proc. SPIE 9329, 93292C (2015).

[Crossref]

Chen, S.-J.

Cheng, L.-C.

Cheng, Y.-H.

S.-Y. Lee, Y.-H. Lai, K.-C. Huang, Y.-H. Cheng, T.-F. Tseng, and C.-K. Sun, “In vivo sub-femtoliter resolution photoacoustic microscopy with higher frame rates,” Sci. Rep. 5, 15421 (2015).

[Crossref] [PubMed]

Chudakov, D. M.

D. M. Chudakov, M. V. Matz, S. Lukyanov, and K. A. Lukyanov, “Fluorescent proteins and their applications in imaging living cells and tissues,” Physiol. Rev. 90(3), 1103–1163 (2010).

[Crossref] [PubMed]

Church, G. M.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Clancy, K. B.

K. B. Clancy, A. C. Koralek, R. M. Costa, D. E. Feldman, and J. M. Carmena, “Volitional modulation of optically recorded calcium signals during neuroprosthetic learning,” Nat. Neurosci. 17(6), 807–809 (2014).

[Crossref] [PubMed]

Clark, C. G.

N. G. Horton, K. Wang, D. Kobat, C. G. Clark, F. W. Wise, C. B. Schaffer, and C. Xu, “In vivo three-photon microscopy of subcortical structures within an intact mouse brain,” Nat. Photonics 7(3), 205–209 (2013).

[Crossref] [PubMed]

Costa, R. M.

K. B. Clancy, A. C. Koralek, R. M. Costa, D. E. Feldman, and J. M. Carmena, “Volitional modulation of optically recorded calcium signals during neuroprosthetic learning,” Nat. Neurosci. 17(6), 807–809 (2014).

[Crossref] [PubMed]

Cybulski, T. R.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

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Dalrymple, D. A.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

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W. Denk, J. H. Strickler, and W. W. Webb, “Two-photon laser scanning fluorescence microscopy,” Science 248(4951), 73–76 (1990).

[Crossref] [PubMed]

Dong, C. Y.

P. T. So, C. Y. Dong, B. R. Masters, and K. M. Berland, “Two-photon excitation fluorescence microscopy,” Annu. Rev. Biomed. Eng. 2(1), 399–429 (2000).

[Crossref] [PubMed]

Drobizhev, M.

Ellisman, M. H.

G. Y. Fan, H. Fujisaki, A. Miyawaki, R.-K. Tsay, R. Y. Tsien, and M. H. Ellisman, “Video-rate scanning two-photon excitation fluorescence microscopy and ratio imaging with cameleons,” Biophys. J. 76(5), 2412–2420 (1999).

[Crossref] [PubMed]

Fan, G. Y.

G. Y. Fan, H. Fujisaki, A. Miyawaki, R.-K. Tsay, R. Y. Tsien, and M. H. Ellisman, “Video-rate scanning two-photon excitation fluorescence microscopy and ratio imaging with cameleons,” Biophys. J. 76(5), 2412–2420 (1999).

[Crossref] [PubMed]

Feldman, D. E.

K. B. Clancy, A. C. Koralek, R. M. Costa, D. E. Feldman, and J. M. Carmena, “Volitional modulation of optically recorded calcium signals during neuroprosthetic learning,” Nat. Neurosci. 17(6), 807–809 (2014).

[Crossref] [PubMed]

Fellin, T.

S. Bovetti, C. Moretti, and T. Fellin, “Mapping brain circuit function in vivo using two-photon fluorescence microscopy,” Microsc. Res. Tech. 77(7), 492–501 (2014).

[Crossref] [PubMed]

Field, J. J.

Fujisaki, H.

G. Y. Fan, H. Fujisaki, A. Miyawaki, R.-K. Tsay, R. Y. Tsien, and M. H. Ellisman, “Video-rate scanning two-photon excitation fluorescence microscopy and ratio imaging with cameleons,” Biophys. J. 76(5), 2412–2420 (1999).

[Crossref] [PubMed]

Glaser, J. I.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Grewe, B. F.

Helmchen, F.

Hoover, E. E.

E. E. Hoover and J. A. Squier, “Advances in multiphoton microscopy technology,” Nat. Photonics 7(2), 93–101 (2013).

[Crossref] [PubMed]

Horton, N. G.

Huang, K.-C.

S.-Y. Lee, Y.-H. Lai, K.-C. Huang, Y.-H. Cheng, T.-F. Tseng, and C.-K. Sun, “In vivo sub-femtoliter resolution photoacoustic microscopy with higher frame rates,” Sci. Rep. 5, 15421 (2015).

[Crossref] [PubMed]

Hughes, T.

C. Stoltzfus, L. Barnett, A. Rebane, T. Hughes, M. Drobizhev, G. Wicks, and A. Mikhailov, “A multidimensional screening method for the selection of two-photon enhanced fluorescent proteins,” Proc. SPIE 8956, 895611 (2014).

[Crossref]

Hughes, T. E.

C. R. Stoltzfus, L. M. Barnett, M. Drobizhev, G. Wicks, A. Mikhaylov, T. E. Hughes, and A. Rebane, “Two-photon directed evolution of green fluorescent proteins,” Sci. Rep. 5, 11968 (2015).

[Crossref] [PubMed]

Imamura, T.

Kajiura-Kobayashi, H.

Kalhor, R.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Kampa, B. M.

B. F. Grewe, D. Langer, H. Kasper, B. M. Kampa, and F. Helmchen, “High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision,” Nat. Methods 7(5), 399–405 (2010).

[Crossref] [PubMed]

Kasper, H.

B. F. Grewe, D. Langer, H. Kasper, B. M. Kampa, and F. Helmchen, “High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision,” Nat. Methods 7(5), 399–405 (2010).

[Crossref] [PubMed]

Kleinfeld, D.

Kobat, D.

N. G. Horton, K. Wang, D. Kobat, C. G. Clark, F. W. Wise, C. B. Schaffer, and C. Xu, “In vivo three-photon microscopy of subcortical structures within an intact mouse brain,” Nat. Photonics 7(3), 205–209 (2013).

[Crossref] [PubMed]

Koralek, A. C.

K. B. Clancy, A. C. Koralek, R. M. Costa, D. E. Feldman, and J. M. Carmena, “Volitional modulation of optically recorded calcium signals during neuroprosthetic learning,” Nat. Neurosci. 17(6), 807–809 (2014).

[Crossref] [PubMed]

Kording, K. P.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Krueppel, R.

F. F. Voigt, J. L. Chen, R. Krueppel, and F. Helmchen, “A modular two-photon microscope for simultaneous imaging of distant cortical areas in vivo,” Proc. SPIE 9329, 93292C (2015).

[Crossref]

Kudenov, M. W.

J. N. Stirman, I. T. Smith, M. W. Kudenov, and S. L. Smith, “Wide field-of-view, twin-region two-photon imaging across extended cortical networks,” bioRxiv011320 (2014).



Lai, Y.-H.

S.-Y. Lee, Y.-H. Lai, K.-C. Huang, Y.-H. Cheng, T.-F. Tseng, and C.-K. Sun, “In vivo sub-femtoliter resolution photoacoustic microscopy with higher frame rates,” Sci. Rep. 5, 15421 (2015).

[Crossref] [PubMed]

Langer, D.

B. F. Grewe, D. Langer, H. Kasper, B. M. Kampa, and F. Helmchen, “High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision,” Nat. Methods 7(5), 399–405 (2010).

[Crossref] [PubMed]

Lee, A. M. D.

Lee, S.-Y.

S.-Y. Lee, Y.-H. Lai, K.-C. Huang, Y.-H. Cheng, T.-F. Tseng, and C.-K. Sun, “In vivo sub-femtoliter resolution photoacoustic microscopy with higher frame rates,” Sci. Rep. 5, 15421 (2015).

[Crossref] [PubMed]

Levene, M. J.

Lui, H.

Lukyanov, K. A.

D. M. Chudakov, M. V. Matz, S. Lukyanov, and K. A. Lukyanov, “Fluorescent proteins and their applications in imaging living cells and tissues,” Physiol. Rev. 90(3), 1103–1163 (2010).

[Crossref] [PubMed]

Lukyanov, S.

D. M. Chudakov, M. V. Matz, S. Lukyanov, and K. A. Lukyanov, “Fluorescent proteins and their applications in imaging living cells and tissues,” Physiol. Rev. 90(3), 1103–1163 (2010).

[Crossref] [PubMed]

Maguire, Y. G.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Maharbiz, M. M.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Makarov, N. S.

Marblestone, A. H.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Maruyama, A.

Masters, B. R.

P. T. So, C. Y. Dong, B. R. Masters, and K. M. Berland, “Two-photon excitation fluorescence microscopy,” Annu. Rev. Biomed. Eng. 2(1), 399–429 (2000).

[Crossref] [PubMed]

Mateo, C.

Matz, M. V.

D. M. Chudakov, M. V. Matz, S. Lukyanov, and K. A. Lukyanov, “Fluorescent proteins and their applications in imaging living cells and tissues,” Physiol. Rev. 90(3), 1103–1163 (2010).

[Crossref] [PubMed]

McLean, D. I.

Mikhailov, A.

C. Stoltzfus, L. Barnett, A. Rebane, T. Hughes, M. Drobizhev, G. Wicks, and A. Mikhailov, “A multidimensional screening method for the selection of two-photon enhanced fluorescent proteins,” Proc. SPIE 8956, 895611 (2014).

[Crossref]

Mikhaylov, A.

C. R. Stoltzfus, L. M. Barnett, M. Drobizhev, G. Wicks, A. Mikhaylov, T. E. Hughes, and A. Rebane, “Two-photon directed evolution of green fluorescent proteins,” Sci. Rep. 5, 11968 (2015).

[Crossref] [PubMed]

Miyawaki, A.

G. Y. Fan, H. Fujisaki, A. Miyawaki, R.-K. Tsay, R. Y. Tsien, and M. H. Ellisman, “Video-rate scanning two-photon excitation fluorescence microscopy and ratio imaging with cameleons,” Biophys. J. 76(5), 2412–2420 (1999).

[Crossref] [PubMed]

Moretti, C.

S. Bovetti, C. Moretti, and T. Fellin, “Mapping brain circuit function in vivo using two-photon fluorescence microscopy,” Microsc. Res. Tech. 77(7), 492–501 (2014).

[Crossref] [PubMed]

Naruse, K.

Nonaka, S.

Oron, D.

Oshima, Y.

Rabaey, J. M.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Rebane, A.

Schaffer, C. B.

Seo, D.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Shapiro, M. G.

A. H. Marblestone, B. M. Zamft, Y. G. Maguire, M. G. Shapiro, T. R. Cybulski, J. I. Glaser, D. Amodei, P. B. Stranges, R. Kalhor, D. A. Dalrymple, D. Seo, E. Alon, M. M. Maharbiz, J. M. Carmena, J. M. Rabaey, E. S. Boyden, G. M. Church, and K. P. Kording, “Physical principles for scalable neural recording,” Front. Comput. Neurosci. 7, 137 (2013).

[Crossref] [PubMed]

Shear, J. B.

C. Xu, W. Zipfel, J. B. Shear, R. M. Williams, and W. W. Webb, “Multiphoton fluorescence excitation: new spectral windows for biological nonlinear microscopy,” Proc. Natl. Acad. Sci. U.S.A. 93(20), 10763–10768 (1996).

[Crossref] [PubMed]

Silberberg, Y.

Smith, I. T.

J. N. Stirman, I. T. Smith, M. W. Kudenov, and S. L. Smith, “Wide field-of-view, twin-region two-photon imaging across extended cortical networks,” bioRxiv011320 (2014).



Smith, S. L.

J. N. Stirman, I. T. Smith, M. W. Kudenov, and S. L. Smith, “Wide field-of-view, twin-region two-photon imaging across extended cortical networks,” bioRxiv011320 (2014).



So, P. T.

P. T. So, C. Y. Dong, B. R. Masters, and K. M. Berland, “Two-photon excitation fluorescence microscopy,” Annu. Rev. Biomed. Eng. 2(1), 399–429 (2000).

[Crossref] [PubMed]

Spangler, B.

M. Drobizhev, A. Rebane, Z. Suo, and B. Spangler, “One-, two- and three-photon spectroscopy of π-conjugated dendrimers: cooperative enhancement and coherent domains,” J. Lumin. 111(4), 291–305 (2005).

[Crossref]

Squier, J. A.

E. E. Hoover and J. A. Squier, “Advances in multiphoton microscopy technology,” Nat. Photonics 7(2), 93–101 (2013).

[Crossref] [PubMed]

Starkey, J. R.

Stirman, J. N.

J. N. Stirman, I. T. Smith, M. W. Kudenov, and S. L. Smith, “Wide field-of-view, twin-region two-photon imaging across extended cortical networks,” bioRxiv011320 (2014).



Stoltzfus, C.

C. Stoltzfus, L. Barnett, A. Rebane, T. Hughes, M. Drobizhev, G. Wicks, and A. Mikhailov, “A multidimensional screening method for the selection of two-photon enhanced fluorescent proteins,” Proc. SPIE 8956, 895611 (2014).

[Crossref]

Stoltzfus, C. R.

C. R. Stoltzfus, L. M. Barnett, M. Drobizhev, G. Wicks, A. Mikhaylov, T. E. Hughes, and A. Rebane, “Two-photon directed evolution of green fluorescent proteins,” Sci. Rep. 5, 11968 (2015).

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