The 49ers’ coaching staff made its feelings known to center Daniel Kilgore throughout the season.

But, in the past, that would not have necessarily meant everyone in the organization had the same thoughts about Kilgore, who was scheduled to be an unrestricted free agent.

“The whole season, coaches and I had a good relationship,” Kilgore said Wednesday on conference call with Bay Area reporters. “Just talking and having one-on-ones with various coaches, I had a positive outlook for the future.

“But that’s just one thing. The coaches have an opinion of you, but then there’s also the front office. That’s two totally different things. And I think for the first time in a long time, our coaches and the front office are on the same page.”

Kilgore was working out back home in Tennessee on Wednesday when he signed a three-year contract to avoid hitting the free-agent market. Kilgore, 30, a seven-year NFL veteran, described the contract as a team-friendly deal.

The 49ers presented Kilgore with a contract offer during the season but negotiations did not get serious until just recently. While the 49ers expressed interest in retaining Kilgore, he said he did not know what the future held for him when he packed his belongings from the locker room on the day after the season ended.

“It kind of makes you nervous because in this profession, people like the younger guys,” Kilgore said. “You just never know what will happen at any time, any given day, in the NFL. So toward the end, that last day of clearing out the locker, I didn’t know if I’d be back. I didn’t know if the Niners would want me back.”

Kilgore was named the winner of the organization’s top honor for an offensive lineman. Kilgore won the Bobb McKittrick Award for best exemplifying the dedication, excellence and commitment of the long-time 49ers offensive line coach. Kilgore started all 29 games in which he appeared the past two seasons, including a career-high 16 games last season.

"I've been here seven years and I consider the Bay Area my second home,” Kilgore said. “To be able to extend my career wearing the 49ers jersey was special to me. This team is heading in the right direction, I wanted to be a part of it."