DEGseq

Identify Differentially Expressed Genes from RNA-seq data

Bioconductor version: 2.5

DEGseq is an R package to identify differentially expressed genes from RNA-Seq data.

Author: Likun Wang <wanglikun at tsinghua.edu.cn> and Xi Wang <wang-xi05 at mails.tsinghua.edu.cn>.

Maintainer: Likun Wang <wanglikun at tsinghua.edu.cn>

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R") biocLite("DEGseq")

To cite this package in a publication, start R and enter:

citation("DEGseq")

Documentation

PDF R Script DEGseq PDF Reference Manual

Details

biocViews RNAseq, Preprocessing, GeneExpression, DifferentialExpression Depends R (>= 2.8.0), qvalue, samr, methods Imports graphics, grDevices, methods, stats, utils Suggests System Requirements License LGPL (>=2) URL Depends On Me Imports Me Suggests Me Version 1.0.5 Since Bioconductor 2.5 (R-2.10)

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